miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|204220738|gb|FD324789.1|FD324789 AATCACCATAGTAACAGCAGAACAGGTCAACAAATCTGTCATGGAGGGCGCGTGCCCAGCGGGCGCGCGAAAGCTCCCAG
CCGGAGACTTGTTTCATGCCGCCGTGTCTGGAGATCCTGAGTGGCTGTGTTTAAGTCTGGAGAGAGTGCAGTCACCAAGT
CAGCAGCAGAATAAACAGGGTCTTACAGTGCTCCACGTGGCTGCTCAACATGGTCAGCTAAATTGCTTGAAACTGCTTCT
GGAATCTTGTACTGTGGAAGTGAATGCATGCTGTCCGCATGGCCGGAGACCGCTACACATGGTGCTGAGCCCAGAGAGCA
AGCCAAACTCTTACTGCTGCCTCACATATCTGCTGGAACATGGAGCAGAACCCAATGTTTCCACAGACGAAGGACTGACC
CCACTGCACCTGGCAGCAGCTGAAGGCCTGAGAGAGTGTGTTGAAGCTCTGGTTAGGGTTGGAGCAGACACACACGCACG
TGATAGCCGAGGACACACACCCCTCGAGTACGCTTGCCTGTGGGGTCACAGGGTTGTTGCCAGAATTCTTAAAAACGCAA
TGTGGCATAGAGATAAGAAGACAGACATGGAGAAACGCAAAGAACTGCAGAGTCTCAAACAGAATATGATCAGGATGCAC
AGGANA




Most similar to sp|Q4R739|ANR53_MACFA

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q4R739|ANR53_MACFA Ankyrin repeat_field domain-containing protein 53
           OS=Macaca fascicularis GN=ANKRD53 PE=2 SV=1
          Length = 496

 Score =  144 bits (363), Expect = 5e-34
 Identities = 76/185 (41%), Positives = 114/185 (61%), Gaps = 2/185 (1%)
 Frame = +2

Query: 89  LFHAAVSGDPEWL--CLSLERVQSPSQQQNKQGLTVLHVAAQHGQLNCLKLLLESCTVEV 262
           LF AAV G+ EWL  CL+    + P+  +   G T +H AAQ G+L CL++L+E     V
Sbjct: 78  LFAAAV-GNVEWLRFCLNQSLREIPTDYK---GFTAIHFAAQRGKLACLQVLVEEYKFPV 133

Query: 263 NACCPHGRRPLHMVLSPESKPNSYCCLTYLLEHGAEPNVSTDEGLTPLHLAAAEGLRECV 442
           N    + + PLH+V+  ++   +  C+ YLLE GA  N  T  G TPLHLA  EGL +CV
Sbjct: 134 NLLTNNSQTPLHLVIHKDNTTVALPCIYYLLEKGAALNAQTCNGCTPLHLAVREGLLDCV 193

Query: 443 EALVRVGADTHARDSRGHTPLEYACLWGHRVVARILKNAMWHRDKKTDMEKRKELQSLKQ 622
           + LV+ GA+ HA+D+ G+ P+++  +W HR  AR LK+AMW +DKK    + +++++LK 
Sbjct: 194 KVLVQSGANVHAQDAMGYKPIDFCKIWNHRACARFLKDAMWKKDKKDFACEMRKMKTLKS 253

Query: 623 NMIRM 637
            +  M
Sbjct: 254 QLALM 258